PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100065340071
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bHLH
Protein Properties Length: 326aa    MW: 36585.1 Da    PI: 8.2142
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100065340071genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH49.95.7e-16132178455
                                   HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                    hn  E+rRR+riN+++  L+ l+P++      K +Ka++L +A+eY+k+Lq
  Ote100065340071|100065340071 132 VHNLSEKRRRSRINEKMKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 178
                                   6*************************7.....5******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.106.7E-19125184IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.09E-19125187IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.86128177IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.65E-15131182No hitNo description
PfamPF000101.9E-13132178IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.9E-18134183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
MANFYNNYHA PQEPDEISVF LQQILLRSSS SSSHSFLRQQ SILPTSXXXX XXXXXXXXXX  60
XXXXXXXXXX XXXXXXXXXX XXXXXXXLLL ETWTMKRMNV AMREAVEALV SETAAKSAPP  120
RCSSKRSRAA EVHNLSEKRR RSRINEKMKA LQNLIPNSNK TDKASMLDEA IEYLKQLQLQ  180
VQANVNYAKR VEPLSSLPAG YAASAQSSFS NETGYSVLRI PENCVKQEHV SDFSSINDKT  240
SADVESSLLP HQFGAFQLCK SSKKEKLLPC LPLVEDRQQG AKVTSSIPDE AQTSRLKDDI  300
LESCVAGAAD ILLTNYVNNQ ALSHHN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011099122.15e-57PREDICTED: transcription factor SPATULA-like
TrEMBLA0A0H3YC586e-92A0A0H3YC58_SALMI; Basic helix-loop-helix transcription factor
STRINGVIT_07s0031g00450.t013e-41(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA98502227